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1

New formulation for derivatives of torsion angles and improper torsion angles in molecular mechanics: Elimination of singularities

Blondel, Arnaud, Karplus, Martin

Journal:

Journal of Computational Chemistry

Année:

1996

Langue:

english

Fichier:

PDF, 776 KB

english, 1996

2

Contribution of molecular diagnosis to the management of cutaneous leishmaniasis in travellers

Lavergne, R.A., Iriart, X., Martin-Blondel, G., Chauvin, P., Menard, S., Fillaux, J., Cassaing, S., Roques-Malecaze, C., Arnaud, S., Valentin, A., Magnaval, J.F., Marchou, B., Berry, A.

Journal:

Clinical Microbiology and Infection

Année:

2014

Langue:

english

Fichier:

PDF, 41 KB

english, 2014

3

Ensemble variance in free energy calculations by thermodynamic integration: Theory, optimal “Alchemical” path, and practical solutions

Journal:

Journal of Computational Chemistry

Année:

2004

Langue:

english

Fichier:

PDF, 130 KB

english, 2004

4

A bragg crystal spectrometer for the soft X-ray diffuse background

R. Rocchia, C. Blondel, M. Arnaud, M. Cantin, B. Mougin, R. Rothenflug

Journal:

Advances in Space Research

Année:

1982

Langue:

english

Fichier:

PDF, 218 KB

english, 1982

5

Prevention and treatment of enteric viral infections: possible benefits of probiotic bacteria

Florence Colbère-Garapin, Sandra Martin-Latil, Bruno Blondel, Laurence Mousson, Isabelle Pelletier, Arnaud Autret, Alan François, Violeta Niborski, Gianfranco Grompone, Guillaume Catonnet, Ariane van

Journal:

Microbes and Infection

Année:

2007

Langue:

english

Fichier:

PDF, 615 KB

english, 2007

6

The conformational plasticity of calmodulin upon calcium complexation gives a model of its interaction with the oedema factor of Bacillus anthracis

Elodie Laine, Julliane D. Yoneda, Arnaud Blondel, Thérèse E. Malliavin

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 898 KB

english, 2008

7

ATP conformations and ion binding modes in the active site of anthrax edema factor: A computational analysis

Leandro Martínez, Elodie Laine, Thérèse E. Malliavin, Michael Nilges, Arnaud Blondel

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 851 KB

english, 2009

8

Mechanism of reactant and product dissociation from the anthrax edema factor: A locally enhanced sampling and steered molecular dynamics study

Leandro Martínez, Thérèse E. Malliavin, Arnaud Blondel

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 3.20 MB

english, 2011

9

Spectral observation of the soft x-ray background and of the north polar spur with solid state spectrometers

R. Rocchia, M. Arnaud, C. Blondel, C. Cheron, J. C. Christy, R. Ducros, L. Koch, R. Rothenflug, H. W. Schnopper, J. P. Delvaille

Journal:

Space Science Reviews

Année:

1981

Langue:

english

Fichier:

PDF, 248 KB

english, 1981

10

Discrimination of agonists versus antagonists of nicotinic ligands based on docking onto AChBP structures

Antoine Taly, Claire Colas, Thérèse Malliavin, Arnaud Blondel, Michael Nilges, Pierre-Jean Corringer, Delphine Joseph

Journal:

Journal of Molecular Graphics and Modelling

Année:

2011

Langue:

english

Fichier:

PDF, 977 KB

english, 2011

11

Re-hospitalization in infants younger than 29 weeks’ gestation in the EPIPAGE cohort

A Lamarche-Vadel, B Blondel, P Truffert, A Burguet, G Cambonie, D Selton, C Arnaud, C Lardennois, C du Mazaubrun, S N'Guyen, J Mathis, G Bréart, M Kaminski, The EPIPAGE Study Group

Journal:

Acta Paediatrica

Année:

2004

Langue:

english

Fichier:

PDF, 76 KB

english, 2004

12

Export and purification of a cytoplasmic dimeric protein by fusion to the maltose-binding protein of Escherichia coli

Arnaud BLONDEL, Hugues BEDOUELLE

Journal:

Année:

1990

Langue:

english

Fichier:

PDF, 770 KB

english, 1990

13

Drug Discovery Targeting Amino Acid Racemases

Conti, Paola, Tamborini, Lucia, Pinto, Andrea, Blondel, Arnaud, Minoprio, Paola, Mozzarelli, Andrea, De Micheli, Carlo

Journal:

Chemical Reviews

Année:

2011

Langue:

english

Fichier:

PDF, 13.68 MB

english, 2011

14

Retinoic acid receptor: a simulation analysis of retinoic acid binding and the resulting conformational changes

Arnaud Blondel, Jean-Paul Renaud, Stefan Fischer, Dino Moras, Martin Karplus

Journal:

Journal of Molecular Biology

Année:

1999

Langue:

english

Fichier:

PDF, 730 KB

english, 1999

15

Complementation between dimeric mutants as a probe of dimer-dimer interactions in tetrameric dihydrofolate reductase encoded by R67 plasmid of E. coli

Julie Dam, Thierry Rose, Michel E. Goldberg, Arnaud Blondel

Journal:

Journal of Molecular Biology

Année:

2000

Langue:

english

Fichier:

PDF, 350 KB

english, 2000

16

Gramicidin and related ion channel-forming peptides, Novartis Foundation Symposium 225 (1999), John Wiley and Sons, Ltd., 1999, $75.00, pp. 273

Journal:

Année:

2001

Langue:

english

Fichier:

PDF, 8 KB

english, 2001

17

Dynamics and Energetics: A Consensus Analysis of the Impact of Calcium on EF-CaM Protein Complex

Laine, Elodie, Blondel, Arnaud, Malliavin, Thérèse E.

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 2.26 MB

english, 2009

18

Activation of the Edema Factor of Bacillus anthracis by Calmodulin: Evidence of an Interplay between the EF-Calmodulin Interaction and Calcium Binding

Laine, Elodie, Martínez, Leandro, Blondel, Arnaud, Malliavin, Thérèse E.

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 823 KB

english, 2010

19

Effect of multiple symmetries on the association of R67 DHFR subunits bearing interfacial complementing mutations

Julie Dam, Arnaud Blondel

Journal:

Protein Science

Année:

2004

Langue:

english

Fichier:

PDF, 446 KB

english, 2004

20

Identification of Cinnamic Acid Derivatives As Novel Antagonists of the Prokaryotic Proton-Gated Ion Channel GLIC

Prevost, Marie S., Delarue-Cochin, Sandrine, Marteaux, Justine, Colas, Claire, Van Renterghem, Catherine, Blondel, Arnaud, Malliavin, Thérèse, Corringer, Pierre-Jean, Joseph, Delphine

Journal:

Journal of Medicinal Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 668 KB

english, 2013

21

Combined Approaches for Drug Design Points the Way to Novel Proline Racemase Inhibitor Candidates to Fight Chagas’ Disease

Berneman, Armand, Montout, Lory, Goyard, Sophie, Chamond, Nathalie, Cosson, Alain, d’Archivio, Simon, Gouault, Nicolas, Uriac, Philippe, Blondel, Arnaud, Minoprio, Paola, Taylor, Paul

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 2.14 MB

english, 2013

22

The Residue Network Architecture of a Protein-Protein Complex Reveals the Linkage between Dynamics and Energetics

Laine, Elodie, Yoneda, Julliane D., Blondel, Arnaud, Malliavin, Thèrèse E.

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 66 KB

english, 2009

23

Exploring the mobility of mobile phone users

Csáji, Balázs Cs., Browet, Arnaud, Traag, V.A., Delvenne, Jean-Charles, Huens, Etienne, Van Dooren, Paul, Smoreda, Zbigniew, Blondel, Vincent D.

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2013

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2013

24

Functional Motions Modulating VanA Ligand Binding Unraveled by Self-Organizing Maps

Bouvier, Guillaume, Duclert-Savatier, Nathalie, Desdouits, Nathan, Meziane-Cherif, Djalal, Blondel, Arnaud, Courvalin, Patrice, Nilges, Michael, Malliavin, Thérèse E.

Journal:

Journal of Chemical Information and Modeling

Année:

2014

Langue:

english

Fichier:

PDF, 2.95 MB

english, 2014

25

Improving Perinatal Regionalization by Predicting Neonatal Intensive Care Requirements of Preterm Infants: An EPIPAGE-Based Cohort Study

Vieux, R., Fresson, J., Hascoet, J.-M., Blondel, B., Truffert, P., Roze, J.-C., Matis, J., Thiriez, G., Arnaud, C., Marpeau, L., Kaminski, M.

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 330 KB

english, 2006

26

Principal Component Analysis reveals correlation of cavities evolution and functional motions in proteins

Desdouits, Nathan, Nilges, Michael, Blondel, Arnaud

Journal:

Journal of Molecular Graphics and Modelling

Année:

2015

Langue:

english

Fichier:

PDF, 3.70 MB

english, 2015

27

Crucial role of inflammatory monocytes in antitumor immunity

Pommier, Arnaud, Lucas, Bruno, Prévost-Blondel, Armelle

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 331 KB

english, 2013

28

Impact of M36I polymorphism on the interaction of HIV-1 protease with its substrates: insights from molecular dynamics

Costa, Mauricio GS, Benetti-Barbosa, Técio G, Desdouits, Nathan, Blondel, Arnaud, Bisch, Paulo M, Pascutti, Pedro G, Batista, Paulo R

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 4.04 MB

english, 2014

29

Identification of binding sites and favorable ligand binding moieties by virtual screening and self-organizing map analysis

Harigua-Souiai, Emna, Cortes-Ciriano, Isidro, Desdouits, Nathan, Malliavin, Thérèse E, Guizani, Ikram, Nilges, Michael, Blondel, Arnaud, Bouvier, Guillaume

Journal:

BMC Bioinformatics

Année:

2015

Langue:

english

Fichier:

PDF, 3.83 MB

english, 2015

30

Destabilizing interactions between the partners of a bifunctional fusion protein

Blondel, Arnaud, Nageotte, Roland, Bedouelle, Hugues

Journal:

Protein Engineering Design and Selection

Année:

1996

Langue:

english

Fichier:

PDF, 833 KB

english, 1996

31

Re-hospitalization in infants younger than 29 weeks' gestation in the EPIPAGE cohort

A, Lamarche-Vadel, B, Blondel, P, Truffert, A, Burguet, G, Cambonie, D, Selton, C, Arnaud, C, Lardennois, Mazaubrun, C du, S, N&#x00027, Guyen, J, Mathis, G, Br&#x000E9, art, M, Kaminski

Journal:

Acta Paediatrica

Année:

2004

Langue:

english

Fichier:

PDF, 592 KB

english, 2004

32

Great Tits build shallower nests than Blue Tits in an insular oak-dominated habitat mosaic

Lambrechts, Marcel M., Blondel, Jacques, Dubuc-Messier, Gabrielle, Marrot, Pascal, de Franceschi, Christophe, Perret, Philippe, Doutrelant, Claire, Grégoire, Arnaud, Charmantier, Anne

Journal:

Avian Biology Research

Année:

2015

Langue:

english

Fichier:

PDF, 137 KB

english, 2015

33

Do very preterm twins and singletons differ in their neurodevelopment at 5 years of age?

Bodeau-Livinec, F., Zeitlin, J., Blondel, B., Arnaud, C., Fresson, J., Burguet, A., Subtil, D., Marret, S., Roze, J.-C., Marchand-Martin, L., Ancel, P.-Y., Kaminski, M.

Journal:

Archives of Disease in Childhood - Fetal and Neonatal Edition

Année:

2013

Langue:

english

Fichier:

PDF, 391 KB

english, 2013

34

Engineering the quaternary structure of an exported protein with a leucine zipper

Blondel, Arnaud, Bedouelle, Hugues

Journal:

Protein Engineering Design and Selection

Année:

1991

Langue:

english

Fichier:

PDF, 2.18 MB

english, 1991

35

Molecular Motions as a Drug Target: Mechanistic Simulations of Anthrax Toxin Edema Factor Function Led to the Discovery of Novel Allosteric Inhibitors

Laine, Élodie, Martínez, Leandro, Ladant, Daniel, Malliavin, Thérèse, Blondel, Arnaud

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 2.10 MB

english, 2012

36

Use of allostery to identify inhibitors of calmodulin-induced activation of Bacillus anthracis edema factor

Elodie Laine, Christophe Goncalves, Johanna C. Karst, Aurélien Lesnard, Sylvain Rault, Wei-Jen Tang, Thérèse E. Malliavin, Daniel Ladant, Arnaud Blondel and John Kuriyan

Journal:

Proceedings of the National Academy of Sciences

Année:

2010

Langue:

english

Fichier:

PDF, 1.40 MB

english, 2010

37

Discussion of Temperatures and Abundances in the North Polar Spur from Soft X-Ray Measurements

Rothenflug, R, Arnaud, M, Blondel, C, Rocchia, R

Journal:

Physica Scripta

Année:

1984

Langue:

english

Fichier:

PDF, 189 KB

english, 1984

38

A Hemodynamic Monitor as a Simulation Tool, a Novel Use of the PiCCO2

Eghiaian, Alexandre, Lanceleur, Antony, Le Maho, Anne Laure, Pouilly, Arnaud, de Kerlidy, Pierre Meudal, Blondel, Pascal, Suria, Stéphanie, Cerf, Charles

Journal:

Simulation in Healthcare The Journal of the Society for Simulation in Healthcare

Année:

2016

Langue:

english

Fichier:

PDF, 421 KB

english, 2016

39

The catalytic domains of C lostridium sordellii lethal toxin and related large clostridial glucosylating toxins specifically recognize the negatively charged phospholipids phosphatidylserine and phosphatidic acid

Varela Chavez, Carolina, Hoos, Sylviane, Haustant, Georges Michel, Chenal, Alexandre, England, Patrick, Blondel, Arnaud, Pauillac, Serge, Lacy, D. Borden, Popoff, Michel Robert

Journal:

Cellular Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2015

40

Immune Reconstitution Inflammatory Syndrome Unmasking or Worsening AIDS-Related Progressive Multifocal Leukoencephalopathy: A Literature Review

Fournier, Anna, Martin-Blondel, Guillaume, Lechapt-Zalcman, Emmanuèle, Dina, Julia, Kazemi, Apolline, Verdon, Renaud, Mortier, Emmanuel, de La Blanchardière, Arnaud

Journal:

Frontiers in Immunology

Année:

2017

Langue:

english

Fichier:

PDF, 148 KB

english, 2017

41

The Tip of the Four N-Terminal α-Helices of Clostridium sordellii Lethal Toxin Contains the Interaction Site with Membrane Phosphatidylserine Facilitating Small GTPases Glucosylation

Varela Chavez, Carolina, Haustant, Georges, Baron, Bruno, England, Patrick, Chenal, Alexandre, Pauillac, Serge, Blondel, Arnaud, Popoff, Michel-Robert

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 4.29 MB

english, 2016

42

The steroid derivative 6-aminocholestanol inhibits the DEAD-box helicase eIF4A (LieIF4A) from the Trypanosomatid parasite Leishmania by perturbing the RNA and ATP binding sites

Abdelkrim, Yosser Zina, Harigua-Souiai, Emna, Barhoumi, Mourad, Banroques, Josette, Blondel, Arnaud, Guizani, Ikram, Tanner, N. Kyle

Journal:

Molecular and Biochemical Parasitology

Année:

2018

Langue:

english

Fichier:

PDF, 826 KB

english, 2018

43

Matrix Approach of Seismic Imaging: Application to the Erebus Volcano, Antarctica

Blondel, Thibaud, Chaput, Julien, Derode, Arnaud, Campillo, Michel, Aubry, Alexandre

Journal:

Journal of Geophysical Research Solid Earth

Année:

2018

Langue:

english

Fichier:

PDF, 2.23 MB

english, 2018

44

mkgridXf: consistent identification of plausible binding sites despite the elusive nature of cavities and grooves in protein dynamics

Monet, Damien, Desdouits, Nathan, Nilges, Michael, Blondel, Arnaud

Journal:

Journal of Chemical Information and Modeling

Année:

2019

Langue:

english

Fichier:

PDF, 8.85 MB

english, 2019

45

SPectral Observation of the Soft X-Ray Background and of the North Polar Spur with Solid State Spectrometers

Rocchia, R., Arnaud, M., Blondel, C., Cheron, C., Christy, J. C., Koch, L., Rothenflug, R., Schnopper, H. W., Delvaille, J. P.

Journal:

Symposium - International Astronomical Union

Année:

1983

Fichier:

PDF, 445 KB

1983

46

Bacterial intracellularly active toxins: membrane localization of the active domain

VarelaâChavez, Carolina, Blondel, Arnaud, Popoff, Michel R.

Journal:

Cellular Microbiology

Année:

2020

Fichier:

PDF, 21.43 MB

2020

47

Clinical and biological characterization of 20 patients with TANGO2 deficiency indicates novel triggers of metabolic crises and no primary energetic defect

BÃ©rat, ClaireâMarine, Montealegre, Sebastian, Wiedemann, Arnaud, Le Corronc Nuzum, Malou, Blondel, AmÃ©lie, Debruge, Hugo, Cano, Aline, Chabrol, Brigitte, Hoebeke, CÃ©lia, Polak, Michel, Stoupa, At

Journal:

Journal of Inherited Metabolic Disease

Année:

2020

Fichier:

PDF, 12.47 MB

2020

48

Analyzing In Silico the Relationship Between the Activation of the Edema Factor and Its Interaction With Calmodulin

Pitard, IrÃ¨ne, Monet, Damien, Goossens, Pierre L., Blondel, Arnaud, Malliavin, ThÃ©rÃ¨se E.

Journal:

Frontiers in Molecular Biosciences

Année:

2020

Fichier:

PDF, 3.72 MB

2020